Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_02415 | Not Available | Positive | 473399 - 475297 | 67120.1 |
| prepilin peptidase | D1781_02420 | Not Available | Positive | 475297 - 476112 | 27470.6 |
| type iv pilus assembly protein pilm | D1781_02425 | Not Available | Positive | 476206 - 477252 | 36849.3 |
| hypothetical protein | D1781_02430 | Not Available | Positive | 477249 - 477965 | 24711.6 |
| hypothetical protein | D1781_02435 | Not Available | Positive | 477962 - 478570 | 20467.0 |
| peptidase | D1781_02440 | Not Available | Positive | 478641 - 480305 | 55821.2 |
| hypothetical protein | D1781_02445 | Not Available | Positive | 480351 - 481271 | 32749.9 |
| hypothetical protein | D1781_02450 | Not Available | Positive | 481189 - 481725 | 17396.4 |
| 30s ribosomal protein s12 | D1781_02455 | Not Available | Positive | 481972 - 482349 | 13898.2 |
| 30s ribosomal protein s7 | D1781_02460 | Not Available | Positive | 482349 - 482819 | 17298.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
