Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flin | D1781_02310 | Not Available | Positive | 450391 - 451095 | 24373.2 |
| hypothetical protein | D1781_02315 | Not Available | Positive | 451108 - 451812 | 24272.3 |
| flagellar biosynthetic protein flip | D1781_02320 | Not Available | Positive | 451809 - 452642 | 29608.3 |
| flagellar biosynthetic protein fliq | D1781_02325 | Not Available | Positive | 452651 - 452926 | 9686.06 |
| type iii secretion protein | D1781_02330 | Not Available | Positive | 452974 - 453693 | 24644.4 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | D1781_02335 | Not Available | Positive | 453851 - 454930 | 38026.0 |
| gnat family n-acetyltransferase | D1781_02340 | Not Available | Positive | 454810 - 455547 | 26355.3 |
| hypothetical protein | D1781_02345 | Not Available | Positive | 455608 - 456534 | 32496.1 |
| mfs transporter | D1781_02350 | Not Available | Negative | 456535 - 457977 | 47006.4 |
| flagellar type iii secretion system protein flha | D1781_02355 | Not Available | Positive | 458073 - 460070 | 70564.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
