Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein | D1781_02210 | Not Available | Positive | 434067 - 435479 | 46075.9 |
| flagellar export chaperone flis | D1781_02215 | Not Available | Positive | 435482 - 435901 | 15398.7 |
| hypothetical protein | D1781_02220 | Not Available | Positive | 435894 - 436217 | 11877.0 |
| cupin domain-containing protein | D1781_02225 | Not Available | Negative | 436235 - 436564 | 11785.0 |
| flagellar biosynthesis protein flgb | D1781_02230 | Not Available | Positive | 436857 - 437198 | 12021.9 |
| flagellar basal-body rod protein flgc | D1781_02235 | Not Available | Positive | 437198 - 437584 | 13518.8 |
| flagellar hook-basal body complex protein flie | D1781_02240 | Not Available | Positive | 437581 - 437901 | 10769.8 |
| flagellar m-ring protein flif | D1781_02245 | Not Available | Positive | 437901 - 439565 | 55091.5 |
| flagellar motor switch protein flig | D1781_02250 | Not Available | Positive | 439562 - 440671 | 39689.7 |
| hypothetical protein | D1781_02255 | Not Available | Positive | 440613 - 441389 | 27331.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
