Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | D1781_02160 | Not Available | Positive | 422382 - 426230 | 141636.0 |
| hypothetical protein | D1781_02165 | Not Available | Positive | 426484 - 426669 | 7095.35 |
| hypothetical protein | D1781_02170 | Not Available | Positive | 426659 - 427414 | 28228.8 |
| hypothetical protein | D1781_02175 | Not Available | Positive | 427702 - 428109 | 15292.3 |
| flagellar assembly protein fliw | D1781_02180 | Not Available | Negative | 428231 - 428647 | 14317.9 |
| flagellar hook-associated protein 3 | D1781_02185 | Not Available | Negative | 428644 - 429630 | 33570.1 |
| flagellar hook-associated protein flgk | D1781_02190 | Not Available | Negative | 429627 - 431057 | 47591.0 |
| flagellar protein flgn | D1781_02195 | Not Available | Negative | 431059 - 431559 | 18088.5 |
| sigma-70 family rna polymerase sigma factor | D1781_02200 | Not Available | Positive | 431831 - 432649 | 29249.6 |
| flagellin | D1781_02205 | Not Available | Positive | 432778 - 433971 | 40117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
