Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | D1781_02110 | Not Available | Negative | 408516 - 413279 | 169573.0 |
| phospholipase | D1781_02115 | Not Available | Negative | 413365 - 413982 | 20760.8 |
| duf4916 domain-containing protein | D1781_02120 | Not Available | Positive | 414030 - 414572 | 19425.3 |
| hypothetical protein | D1781_02125 | Not Available | Positive | 414649 - 415017 | 12427.9 |
| hypothetical protein | D1781_02130 | Not Available | Negative | 415139 - 415639 | 18547.1 |
| aminoglycoside phosphotransferase family protein | D1781_02135 | Not Available | Negative | 415693 - 416757 | 36505.3 |
| duf427 domain-containing protein | D1781_02140 | Not Available | Positive | 416702 - 417004 | 11437.3 |
| m48 family peptidase | D1781_02145 | Not Available | Negative | 417114 - 417575 | 17280.7 |
| spermine synthase | D1781_02150 | Not Available | Negative | 417605 - 418453 | 29452.4 |
| dna-directed rna polymerase subunit beta | D1781_02155 | Not Available | Positive | 418816 - 422331 | 128889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
