Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase | D1781_02010 | Not Available | Positive | 387769 - 389250 | 54441.9 |
| alkaline phosphatase | D1781_02015 | Not Available | Positive | 389398 - 390663 | 44235.7 |
| hypothetical protein | D1781_02020 | Not Available | Positive | 390867 - 391058 | 7125.42 |
| serine hydrolase | D1781_02025 | Not Available | Positive | 391569 - 392840 | 45500.9 |
| atp-dependent clp protease atp-binding subunit | D1781_02030 | Not Available | Positive | 392985 - 395483 | 91822.2 |
| amino-acid n-acetyltransferase | D1781_02035 | Not Available | Positive | 395586 - 396110 | 18969.9 |
| beta-phosphoglucomutase family hydrolase | D1781_02040 | Not Available | Positive | 396211 - 396960 | 25649.3 |
| glycoside hydrolase family 65 protein | D1781_02045 | Not Available | Positive | 396957 - 399446 | 93649.4 |
| dna repair protein rada | D1781_02050 | Not Available | Negative | 399482 - 400813 | 46385.1 |
| alpha/beta hydrolase | D1781_02055 | Not Available | Positive | 400825 - 401826 | 36284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
