Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | D1781_01960 | Not Available | Positive | 377895 - 379328 | 47034.2 |
| inorganic diphosphatase | D1781_01965 | Not Available | Negative | 379435 - 379935 | 18579.8 |
| trna lysidine(34) synthetase tils | D1781_01970 | Not Available | Positive | 379980 - 380960 | 33311.1 |
| hypoxanthine phosphoribosyltransferase | D1781_01975 | Not Available | Positive | 380975 - 381538 | 20817.2 |
| atp-dependent zinc metalloprotease ftsh | D1781_01980 | Not Available | Positive | 381651 - 383669 | 72548.0 |
| duf3180 domain-containing protein | D1781_01985 | Not Available | Positive | 383717 - 384202 | 16847.0 |
| ph domain-containing protein | D1781_01990 | Not Available | Positive | 384199 - 384702 | 17952.5 |
| hypothetical protein | D1781_01995 | Not Available | Positive | 384707 - 386182 | 53035.8 |
| duf2520 domain-containing protein | D1781_02000 | Not Available | Positive | 386179 - 386886 | 23829.9 |
| pantoate--beta-alanine ligase | D1781_02005 | Not Available | Positive | 386883 - 387731 | 29051.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
