Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D1781_01760 | Not Available | Positive | 343032 - 343847 | 28700.6 |
| duf1801 domain-containing protein | D1781_01765 | Not Available | Positive | 343994 - 344425 | 15971.1 |
| duf3459 domain-containing protein | D1781_01770 | Not Available | Negative | 344427 - 345683 | 46315.5 |
| hypothetical protein | D1781_01775 | Not Available | Negative | 345776 - 346813 | 35065.9 |
| tetr family transcriptional regulator | D1781_01780 | Not Available | Negative | 346981 - 347631 | 23459.3 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | D1781_01785 | Not Available | Positive | 347630 - 348850 | 40607.4 |
| hypothetical protein | D1781_01790 | Not Available | Positive | 348960 - 349430 | 17028.6 |
| rhodopsin | D1781_01795 | Not Available | Positive | 349427 - 350320 | 32085.2 |
| arac family transcriptional regulator | D1781_01800 | Not Available | Negative | 350328 - 351356 | 36879.8 |
| duf2382 domain-containing protein | D1781_01805 | Not Available | Negative | 351445 - 352260 | 29652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
