Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | D1781_17250 | Not Available | Negative | 3464892 - 3466328 | 50887.7 |
| polysaccharide biosynthesis tyrosine autokinase | D1781_17255 | Not Available | Positive | 3466180 - 3467664 | 52611.9 |
| o-antigen ligase domain-containing protein | D1781_17260 | Not Available | Positive | 3467678 - 3468994 | 46062.9 |
| hypothetical protein | D1781_17265 | Not Available | Positive | 3468994 - 3470073 | 39198.5 |
| glycosyltransferase family 1 protein | D1781_17270 | Not Available | Positive | 3470108 - 3471274 | 41820.9 |
| hypothetical protein | D1781_17275 | Not Available | Positive | 3471271 - 3472065 | 28200.8 |
| hypothetical protein | D1781_17280 | Not Available | Positive | 3472062 - 3473651 | 57781.1 |
| hypothetical protein | D1781_17285 | Not Available | Positive | 3473648 - 3475135 | 51348.1 |
| glycosyltransferase | D1781_17290 | Not Available | Negative | 3475163 - 3476053 | 32388.4 |
| gdp-l-fucose synthase | D1781_17295 | Not Available | Negative | 3476241 - 3477215 | 35073.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
