Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_17200 | Not Available | Negative | 3454957 - 3455346 | 14239.0 |
| hypothetical protein | D1781_17205 | Not Available | Positive | 3455519 - 3456127 | 22345.1 |
| nad-dependent epimerase/dehydratase family protein | D1781_17210 | Not Available | Positive | 3457098 - 3457232 | 4959.05 |
| nad-dependent epimerase/dehydratase family protein | D1781_17215 | Not Available | Negative | 3457233 - 3457367 | 4959.05 |
| sgnh/gdsl hydrolase family protein | D1781_17220 | Not Available | Negative | 3458073 - 3458795 | 24664.3 |
| hypothetical protein | D1781_17225 | Not Available | Positive | 3459131 - 3460141 | 36360.5 |
| hypothetical protein | D1781_17230 | Not Available | Positive | 3460278 - 3462275 | 68645.4 |
| acyltransferase | D1781_17235 | Not Available | Positive | 3462296 - 3462910 | 21118.9 |
| glycosyltransferase | D1781_17240 | Not Available | Positive | 3462907 - 3464046 | 41812.8 |
| glycosyltransferase family 2 protein | D1781_17245 | Not Available | Positive | 3464043 - 3464891 | 30525.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
