Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | D1781_01660 | Not Available | Negative | 318343 - 319086 | 25828.5 |
| cation transporter | D1781_01665 | Not Available | Negative | 319147 - 320067 | 31454.6 |
| amidophosphoribosyltransferase | D1781_01670 | Not Available | Negative | 320502 - 321971 | 53897.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | D1781_01675 | Not Available | Positive | 322060 - 323151 | 36981.0 |
| duf3073 domain-containing protein | D1781_01680 | Not Available | Negative | 323228 - 323398 | 6391.19 |
| nad(p)/fad-dependent oxidoreductase | D1781_01685 | Not Available | Positive | 323533 - 324729 | 42812.9 |
| apc family permease | D1781_01690 | Not Available | Negative | 324841 - 326889 | 73416.1 |
| efflux rnd transporter permease subunit | D1781_01695 | Not Available | Positive | 326888 - 330208 | 115448.0 |
| mbl fold metallo-hydrolase | D1781_01700 | Not Available | Positive | 330392 - 331159 | 26551.9 |
| atp-dependent helicase | D1781_01705 | Not Available | Positive | 331300 - 333273 | 73235.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
