Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_17100 | Not Available | Positive | 3427067 - 3428563 | 52676.9 |
| alpha/beta hydrolase | D1781_17105 | Not Available | Positive | 3428845 - 3429774 | 32652.1 |
| hypothetical protein | D1781_17110 | Not Available | Negative | 3430163 - 3432754 | 90257.6 |
| luxr family transcriptional regulator | D1781_17115 | Not Available | Negative | 3432920 - 3435406 | 86173.3 |
| hypothetical protein | D1781_17120 | Not Available | Negative | 3435568 - 3436317 | 26155.4 |
| hypothetical protein | D1781_17125 | Not Available | Positive | 3436404 - 3436625 | 7623.91 |
| vanz family protein | D1781_17130 | Not Available | Negative | 3436583 - 3437206 | 21480.7 |
| hypothetical protein | D1781_17135 | Not Available | Positive | 3437260 - 3437850 | 20433.1 |
| hypothetical protein | D1781_17140 | Not Available | Positive | 3438456 - 3442076 | 123074.0 |
| fad-dependent oxidoreductase | D1781_17145 | Not Available | Positive | 3442144 - 3443265 | 38841.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
