Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, class i | D1781_17000 | Not Available | Positive | 3401891 - 3403216 | 45867.4 |
| cdp-alcohol phosphatidyltransferase family protein | D1781_17005 | Not Available | Positive | 3403311 - 3404099 | 27872.5 |
| hypothetical protein | D1781_17010 | Not Available | Positive | 3404312 - 3404503 | 7714.55 |
| polysaccharide biosynthesis tyrosine autokinase | D1781_17015 | Not Available | Positive | 3404874 - 3406364 | 51629.3 |
| lipopolysaccharide biosynthesis protein | D1781_17020 | Not Available | Positive | 3406294 - 3409155 | 101774.0 |
| glycosyltransferase family 2 protein | D1781_17025 | Not Available | Positive | 3409152 - 3410060 | 33157.7 |
| hypothetical protein | D1781_17030 | Not Available | Negative | 3410063 - 3411022 | 33164.6 |
| glycosyl transferase | D1781_17035 | Not Available | Positive | 3412118 - 3413152 | 38406.0 |
| glycosyltransferase family 2 protein | D1781_17040 | Not Available | Negative | 3413128 - 3414102 | 34957.8 |
| hypothetical protein | D1781_17045 | Not Available | Positive | 3414134 - 3414784 | 22254.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
