Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | D1781_16850 | Not Available | Negative | 3363982 - 3365394 | 50751.8 |
| duf4012 domain-containing protein | D1781_16855 | Not Available | Negative | 3365491 - 3367359 | 66815.8 |
| glycosyltransferase | D1781_16860 | Not Available | Positive | 3367578 - 3369512 | 71943.9 |
| glycosyltransferase | D1781_16865 | Not Available | Positive | 3369515 - 3371431 | 68842.6 |
| alcohol dehydrogenase | D1781_16870 | Not Available | Negative | 3371439 - 3371858 | 15599.8 |
| hypothetical protein | D1781_16875 | Not Available | Positive | 3371952 - 3372377 | 14967.2 |
| copg family transcriptional regulator | D1781_16880 | Not Available | Negative | 3372383 - 3372589 | 7688.35 |
| hypothetical protein | D1781_16885 | Not Available | Positive | 3372927 - 3373139 | 8402.09 |
| hypothetical protein | D1781_16890 | Not Available | Positive | 3373121 - 3374890 | 60760.4 |
| right-handed parallel beta-helix repeat-containing protein | D1781_16895 | Not Available | Negative | 3374945 - 3376489 | 55269.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
