Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit epsilon | D1781_16750 | Not Available | Negative | 3337156 - 3337371 | 7896.29 |
| acyl-coa carboxylase subunit beta | D1781_16755 | Not Available | Negative | 3337368 - 3338969 | 57002.0 |
| biotin--[acetyl-coa-carboxylase] ligase | D1781_16760 | Not Available | Positive | 3339032 - 3339826 | 26806.1 |
| ph domain-containing protein | D1781_16765 | Not Available | Positive | 3339830 - 3340363 | 19728.5 |
| gtra family protein | D1781_16770 | Not Available | Negative | 3340415 - 3340885 | 16982.0 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | D1781_16775 | Not Available | Positive | 3341014 - 3342144 | 40229.1 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | D1781_16780 | Not Available | Positive | 3342343 - 3342810 | 15776.2 |
| hypothetical protein | D1781_16785 | Not Available | Positive | 3342807 - 3344144 | 46092.0 |
| lytr family transcriptional regulator | D1781_16790 | Not Available | Positive | 3344243 - 3345604 | 48387.9 |
| hypothetical protein | D1781_16795 | Not Available | Positive | 3345658 - 3346854 | 42484.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
