Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-quinone dehydrogenase | D1781_16695 | Not Available | Positive | 3324132 - 3325568 | 50175.8 |
| duf4397 domain-containing protein | D1781_16700 | Not Available | Positive | 3325721 - 3326404 | 23565.8 |
| atp-grasp domain-containing protein | D1781_16705 | Not Available | Negative | 3326474 - 3328279 | 63603.7 |
| septum formation inhibitor maf | D1781_16710 | Not Available | Negative | 3328367 - 3329002 | 21907.9 |
| class i sam-dependent rna methyltransferase | D1781_16715 | Not Available | Positive | 3329044 - 3330252 | 42612.7 |
| dna-binding response regulator | D1781_16720 | Not Available | Positive | 3330434 - 3331093 | 23099.9 |
| hypothetical protein | D1781_16725 | Not Available | Positive | 3331083 - 3332315 | 42014.8 |
| hypothetical protein | D1781_16730 | Not Available | Positive | 3332312 - 3333331 | 36138.7 |
| dna-binding response regulator | D1781_16735 | Not Available | Positive | 3333440 - 3334132 | 24158.0 |
| hypothetical protein | D1781_16745 | Not Available | Positive | 3335372 - 3336394 | 37173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
