Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_01510 | Not Available | Negative | 291323 - 291751 | 16375.6 |
| had family hydrolase | D1781_01515 | Not Available | Negative | 291858 - 292667 | 28668.0 |
| duf418 domain-containing protein | D1781_01520 | Not Available | Negative | 292717 - 293724 | 34097.3 |
| cardiolipin synthase | D1781_01525 | Not Available | Positive | 293785 - 295251 | 54539.9 |
| duf429 domain-containing protein | D1781_01530 | Not Available | Positive | 295182 - 296720 | 55231.3 |
| hypothetical protein | D1781_01535 | Not Available | Negative | 296829 - 297134 | 11312.8 |
| dna-binding response regulator | D1781_01540 | Not Available | Negative | 297254 - 297919 | 23680.7 |
| sensor histidine kinase | D1781_01545 | Not Available | Negative | 297916 - 299022 | 38874.6 |
| atp-dependent clp protease adapter clps | D1781_01550 | Not Available | Positive | 299167 - 299451 | 10938.1 |
| duf2017 family protein | D1781_01555 | Not Available | Positive | 299448 - 299924 | 16762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
