Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_01460 | Not Available | Positive | 281111 - 283153 | 70049.2 |
| tetr/acrr family transcriptional regulator | D1781_01465 | Not Available | Negative | 283229 - 283831 | 21668.9 |
| dha2 family efflux mfs transporter permease subunit | D1781_01470 | Not Available | Positive | 283898 - 285319 | 47389.2 |
| aec family transporter | D1781_01475 | Not Available | Positive | 285391 - 286317 | 31841.2 |
| shikimate dehydrogenase | D1781_01480 | Not Available | Positive | 286488 - 287426 | 33097.4 |
| low molecular weight phosphotyrosine protein phosphatase | D1781_01485 | Not Available | Negative | 287477 - 287968 | 17785.9 |
| exodeoxyribonuclease iii | D1781_01490 | Not Available | Negative | 287992 - 288831 | 31213.7 |
| hypothetical protein | D1781_01495 | Not Available | Positive | 288887 - 289738 | 30330.7 |
| orotate phosphoribosyltransferase | D1781_01500 | Not Available | Positive | 289795 - 290343 | 18856.7 |
| asparaginase | D1781_01505 | Not Available | Positive | 290360 - 291313 | 31323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
