Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | D1781_01410 | Not Available | Positive | 271656 - 272621 | 34328.0 |
| abc transporter permease | D1781_01415 | Not Available | Positive | 272621 - 273370 | 26734.4 |
| duf1540 domain-containing protein | D1781_01420 | Not Available | Positive | 273500 - 273790 | 9815.38 |
| hypothetical protein | D1781_01425 | Not Available | Negative | 273851 - 275212 | 51054.6 |
| hypothetical protein | D1781_01430 | Not Available | Negative | 275319 - 275687 | 12083.3 |
| laci family transcriptional regulator | D1781_01435 | Not Available | Positive | 275813 - 276856 | 36105.1 |
| extracellular solute-binding protein | D1781_01440 | Not Available | Positive | 276897 - 278168 | 45323.8 |
| sugar abc transporter permease | D1781_01445 | Not Available | Positive | 278165 - 279115 | 34197.0 |
| carbohydrate abc transporter permease | D1781_01450 | Not Available | Positive | 279115 - 280032 | 32940.8 |
| glycosidase | D1781_01455 | Not Available | Positive | 280029 - 281111 | 39185.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
