Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lycopene cyclase domain-containing protein | D1781_01310 | Not Available | Positive | 252954 - 253286 | 11802.9 |
| lycopene cyclase domain-containing protein | D1781_01315 | Not Available | Positive | 253295 - 253588 | 10094.8 |
| prenyltransferase | D1781_01320 | Not Available | Positive | 253585 - 254448 | 30260.4 |
| duf427 domain-containing protein | D1781_01325 | Not Available | Positive | 254466 - 254966 | 18271.7 |
| mfs transporter | D1781_01330 | Not Available | Negative | 254916 - 256283 | 46648.4 |
| rhomboid family intramembrane serine protease | D1781_01335 | Not Available | Positive | 256531 - 257436 | 32095.9 |
| molecular chaperone dnak | D1781_01340 | Not Available | Positive | 257599 - 259458 | 66484.8 |
| nucleotide exchange factor grpe | D1781_01345 | Not Available | Positive | 259455 - 260060 | 21624.7 |
| j domain-containing protein | D1781_01350 | Not Available | Positive | 260064 - 261050 | 34146.0 |
| merr family transcriptional regulator | D1781_01355 | Not Available | Positive | 261124 - 261570 | 16627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
