Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | D1781_01205 | Not Available | Positive | 236855 - 237820 | 34473.6 |
| 2-oxo acid dehydrogenase subunit e2 | D1781_01210 | Not Available | Positive | 237828 - 239129 | 45735.8 |
| abc transporter substrate-binding protein | D1781_01215 | Not Available | Positive | 239185 - 240087 | 31926.5 |
| metal abc transporter atp-binding protein | D1781_01220 | Not Available | Positive | 240084 - 240878 | 28486.3 |
| metal abc transporter permease | D1781_01225 | Not Available | Positive | 240875 - 241714 | 28231.8 |
| transcriptional repressor | D1781_01230 | Not Available | Positive | 241711 - 242094 | 13788.0 |
| 50s ribosomal protein l28 | D1781_01235 | Not Available | Positive | 242367 - 242603 | 8528.45 |
| 50s ribosomal protein l33 | D1781_01240 | Not Available | Positive | 242603 - 242770 | 6615.03 |
| 30s ribosomal protein s14 | D1781_01245 | Not Available | Positive | 242773 - 243078 | 11639.1 |
| integration host factor | D1781_01250 | Not Available | Positive | 243185 - 243469 | 9737.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
