Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | D1781_01155 | Not Available | Positive | 227388 - 227846 | 16023.2 |
| replicative dna helicase | D1781_01160 | Not Available | Positive | 228306 - 229679 | 49720.2 |
| hypothetical protein | D1781_01165 | Not Available | Positive | 229822 - 230382 | 18505.3 |
| hypothetical protein | D1781_01170 | Not Available | Positive | 230379 - 230654 | 9599.01 |
| gaf domain-containing protein | D1781_01175 | Not Available | Negative | 230667 - 231872 | 42399.6 |
| adenylosuccinate lyase | D1781_01180 | Not Available | Negative | 231977 - 233359 | 50540.2 |
| hypothetical protein | D1781_01185 | Not Available | Positive | 233473 - 233685 | 6914.36 |
| hypothetical protein | D1781_01190 | Not Available | Positive | 233694 - 235013 | 44617.5 |
| phage holin family protein | D1781_01195 | Not Available | Negative | 235089 - 235508 | 14812.8 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | D1781_01200 | Not Available | Positive | 235755 - 236849 | 40030.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
