Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | D1781_01105 | Not Available | Negative | 216828 - 217778 | 33230.7 |
| plp-dependent aminotransferase family protein | D1781_01110 | Not Available | Negative | 217796 - 219115 | 47622.3 |
| thioredoxin | D1781_01115 | Not Available | Negative | 219308 - 219625 | 11509.9 |
| thioredoxin-disulfide reductase | D1781_01120 | Not Available | Negative | 219668 - 220699 | 36418.0 |
| murein biosynthesis integral membrane protein murj | D1781_01125 | Not Available | Negative | 220797 - 222413 | 55946.7 |
| hypothetical protein | D1781_01130 | Not Available | Negative | 222410 - 224428 | 67566.2 |
| cca trna nucleotidyltransferase | D1781_01135 | Not Available | Positive | 224533 - 225963 | 52946.1 |
| 30s ribosomal protein s6 | D1781_01140 | Not Available | Positive | 226102 - 226509 | 15006.8 |
| single-stranded dna-binding protein | D1781_01145 | Not Available | Positive | 226516 - 227070 | 18979.6 |
| 30s ribosomal protein s18 | D1781_01150 | Not Available | Positive | 227117 - 227374 | 9362.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
