Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | D1781_01055 | Not Available | Negative | 209193 - 210635 | 53168.2 |
| 50s ribosomal protein l34 | D1781_01060 | Not Available | Positive | 211016 - 211153 | 5281.56 |
| ribonuclease p protein component | D1781_01065 | Not Available | Positive | 211172 - 211510 | 12328.2 |
| membrane protein insertion efficiency factor yidd | D1781_01070 | Not Available | Positive | 211507 - 211806 | 10919.3 |
| membrane protein insertase yidc | D1781_01075 | Not Available | Positive | 211812 - 212819 | 37246.9 |
| dna-binding protein | D1781_01080 | Not Available | Positive | 212816 - 213352 | 18885.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | D1781_01085 | Not Available | Positive | 213349 - 213996 | 22836.9 |
| para family protein | D1781_01090 | Not Available | Positive | 214036 - 214950 | 32729.1 |
| parb/repb/spo0j family partition protein | D1781_01095 | Not Available | Positive | 215025 - 215981 | 35636.8 |
| phosphosulfolactate phosphohydrolase | D1781_01100 | Not Available | Positive | 216035 - 216793 | 25512.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
