Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family efflux mfs transporter | D1781_00805 | Not Available | Positive | 157229 - 158470 | 42038.8 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | D1781_00810 | Not Available | Negative | 158598 - 160004 | 48711.6 |
| porphobilinogen synthase | D1781_00815 | Not Available | Negative | 159986 - 160963 | 34844.4 |
| uroporphyrinogen-iii synthase | D1781_00820 | Not Available | Negative | 160960 - 161748 | 27178.6 |
| hydroxymethylbilane synthase | D1781_00825 | Not Available | Negative | 161745 - 162737 | 33471.8 |
| ferrochelatase | D1781_00830 | Not Available | Negative | 162683 - 163861 | 42052.4 |
| chlorite dismutase | D1781_00835 | Not Available | Negative | 163855 - 164517 | 24553.1 |
| duf3618 domain-containing protein | D1781_00840 | Not Available | Negative | 164722 - 164985 | 9538.5 |
| phage holin family protein | D1781_00845 | Not Available | Negative | 164975 - 165436 | 16601.5 |
| hypothetical protein | D1781_00850 | Not Available | Negative | 165442 - 165696 | 9000.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
