Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase/arogenate dehydrogenase family protein | D1781_00600 | Not Available | Positive | 115074 - 117335 | 78421.8 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | D1781_00605 | Not Available | Positive | 117417 - 119039 | 57375.8 |
| hypothetical protein | D1781_00610 | Not Available | Negative | 119092 - 120015 | 33621.4 |
| duf202 domain-containing protein | D1781_00615 | Not Available | Negative | 120137 - 120466 | 11227.2 |
| duf202 domain-containing protein | D1781_00620 | Not Available | Negative | 120463 - 120828 | 12614.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | D1781_00625 | Not Available | Negative | 120845 - 121642 | 28394.3 |
| universal stress protein | D1781_00630 | Not Available | Negative | 121697 - 122551 | 29632.6 |
| amino acid permease | D1781_00635 | Not Available | Negative | 122548 - 123948 | 48670.6 |
| zinc metalloprotease htpx | D1781_00640 | Not Available | Negative | 124098 - 124973 | 31070.1 |
| hypothetical protein | D1781_00645 | Not Available | Positive | 125355 - 126002 | 21321.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
