Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | D1781_00505 | Not Available | Positive | 97635 - 98288 | 22265.9 |
| hypothetical protein | D1781_00510 | Not Available | Positive | 98285 - 98611 | 11643.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 98855 - 98951 | Not Available |
| atp-binding protein | D1781_00515 | Not Available | Negative | 98586 - 99176 | 21014.7 |
| alpha-mannosidase | D1781_00520 | Not Available | Negative | 99173 - 102175 | 107861.0 |
| glycoside hydrolase family 2 | D1781_00525 | Not Available | Positive | 102340 - 104172 | 66984.2 |
| marr family transcriptional regulator | D1781_00530 | Not Available | Negative | 104264 - 104707 | 15520.8 |
| voc family protein | D1781_00535 | Not Available | Positive | 104776 - 105141 | 12864.2 |
| alpha/beta hydrolase | D1781_00540 | Not Available | Positive | 105206 - 106036 | 29055.6 |
| tetr/acrr family transcriptional regulator | D1781_00545 | Not Available | Positive | 106029 - 106607 | 20208.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
