Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_04885 | Not Available | Negative | 958565 - 959275 | 26092.4 |
| hypothetical protein | D1781_04890 | Not Available | Negative | 959272 - 961347 | 72846.4 |
| carbohydrate abc transporter permease | D1781_04895 | Not Available | Negative | 961427 - 962311 | 31767.5 |
| sugar abc transporter permease | D1781_04900 | Not Available | Negative | 962308 - 963282 | 34861.3 |
| extracellular solute-binding protein | D1781_04905 | Not Available | Negative | 963363 - 964688 | 47034.6 |
| laci family transcriptional regulator | D1781_04910 | Not Available | Negative | 964854 - 965900 | 36772.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | D1781_04915 | Not Available | Positive | 966092 - 967264 | 42082.3 |
| flavin reductase | D1781_04920 | Not Available | Positive | 967656 - 968414 | 26871.3 |
| rok family protein | D1781_04925 | Not Available | Positive | 968488 - 969663 | 39500.6 |
| aldehyde dehydrogenase family protein | D1781_04930 | Not Available | Negative | 969685 - 971412 | 59744.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
