Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | D1781_04835 | Not Available | Negative | 946491 - 948824 | 81838.9 |
| carbohydrate abc transporter permease | D1781_04840 | Not Available | Negative | 948821 - 949702 | 31314.2 |
| sugar abc transporter permease | D1781_04845 | Not Available | Negative | 949702 - 950709 | 36176.8 |
| extracellular solute-binding protein | D1781_04850 | Not Available | Negative | 950721 - 952004 | 44726.6 |
| laci family transcriptional regulator | D1781_04855 | Not Available | Positive | 952127 - 953134 | 34725.4 |
| sugar phosphate isomerase/epimerase | D1781_04860 | Not Available | Positive | 953278 - 954036 | 26909.3 |
| gfo/idh/moca family oxidoreductase | D1781_04865 | Not Available | Positive | 954033 - 955172 | 39415.8 |
| gfo/idh/moca family oxidoreductase | D1781_04870 | Not Available | Positive | 955169 - 956281 | 39048.1 |
| gfo/idh/moca family oxidoreductase | D1781_04875 | Not Available | Negative | 956354 - 957505 | 41327.9 |
| sugar phosphate isomerase/epimerase | D1781_04880 | Not Available | Negative | 957508 - 958512 | 37382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
