Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | D1781_04785 | Not Available | Positive | 931270 - 932313 | 37565.6 |
| extracellular solute-binding protein | D1781_04790 | Not Available | Positive | 932447 - 933748 | 47027.1 |
| sugar abc transporter permease | D1781_04795 | Not Available | Positive | 933887 - 934729 | 30514.0 |
| carbohydrate abc transporter permease | D1781_04800 | Not Available | Positive | 934858 - 935667 | 29674.6 |
| alpha-galactosidase | D1781_04805 | Not Available | Positive | 935737 - 937845 | 76605.1 |
| duf4981 domain-containing protein | D1781_04810 | Not Available | Positive | 937842 - 940715 | 104277.0 |
| hypothetical protein | D1781_04815 | Not Available | Negative | 940762 - 941820 | 38007.6 |
| hnh endonuclease | D1781_04820 | Not Available | Positive | 942169 - 943545 | 49593.9 |
| xylulokinase | D1781_04825 | Not Available | Negative | 943743 - 945170 | 47996.7 |
| xylose isomerase | D1781_04830 | Not Available | Negative | 945198 - 946388 | 43718.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
