Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 family protein | D1781_04735 | Not Available | Positive | 921757 - 922500 | 28419.7 |
| hypothetical protein | D1781_04740 | Not Available | Negative | 922517 - 923245 | 25221.8 |
| aldo/keto reductase | D1781_04745 | Not Available | Positive | 923369 - 924379 | 36646.1 |
| voc family protein | D1781_04750 | Not Available | Negative | 924451 - 924816 | 12811.3 |
| yafy family transcriptional regulator | D1781_04755 | Not Available | Positive | 924917 - 925885 | 35164.3 |
| laci family dna-binding transcriptional regulator | D1781_04760 | Not Available | Positive | 925882 - 926919 | 35706.4 |
| l-ribulose-5-phosphate 4-epimerase | D1781_04765 | Not Available | Positive | 927039 - 927758 | 25419.2 |
| l-arabinose isomerase | D1781_04770 | Not Available | Positive | 927763 - 929274 | 54443.8 |
| hypothetical protein | D1781_04775 | Not Available | Positive | 929271 - 929465 | 6836.4 |
| atpase | D1781_04780 | Not Available | Positive | 929503 - 931086 | 54788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
