Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_04630 | Not Available | Negative | 899425 - 899763 | 11898.9 |
| abc transporter atp-binding protein | D1781_04635 | Not Available | Negative | 899744 - 901411 | 61183.4 |
| aldo/keto reductase | D1781_04640 | Not Available | Negative | 901553 - 902539 | 36183.6 |
| adenosine deaminase | D1781_04645 | Not Available | Positive | 902478 - 903587 | 39700.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D1781_04655 | Not Available | Negative | 903870 - 904922 | 37839.0 |
| phospholipid carrier-dependent glycosyltransferase | D1781_04660 | Not Available | Negative | 905068 - 906687 | 59332.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | D1781_04665 | Not Available | Positive | 906754 - 907575 | 28314.1 |
| nadp-dependent oxidoreductase | D1781_04670 | Not Available | Positive | 907615 - 908544 | 31544.5 |
| methionine--trna ligase | D1781_04675 | Not Available | Positive | 908595 - 910181 | 58781.6 |
| tatd family deoxyribonuclease | D1781_04680 | Not Available | Positive | 910292 - 911179 | 32098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
