Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | D1781_04380 | Not Available | Positive | 855526 - 855990 | 16368.3 |
| mfs transporter | D1781_04385 | Not Available | Positive | 856063 - 857388 | 45070.1 |
| llm class flavin-dependent oxidoreductase | D1781_04390 | Not Available | Positive | 857464 - 858639 | 43596.3 |
| marr family transcriptional regulator | D1781_04395 | Not Available | Positive | 858636 - 859082 | 16695.0 |
| nadh-dependent fmn reductase | D1781_04400 | Not Available | Positive | 859101 - 859775 | 23028.5 |
| voc family protein | D1781_04405 | Not Available | Negative | 859783 - 860160 | 13147.7 |
| hnh endonuclease | D1781_04410 | Not Available | Positive | 860222 - 860596 | 14168.1 |
| gaf domain-containing protein | D1781_04415 | Not Available | Positive | 860446 - 862215 | 63022.6 |
| hypothetical protein | D1781_04420 | Not Available | Positive | 862265 - 862879 | 22718.9 |
| d-alanine--d-alanine ligase | D1781_04425 | Not Available | Negative | 862831 - 863835 | 33313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
