Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_04330 | Not Available | Negative | 847835 - 848215 | 12596.2 |
| amino acid abc transporter substrate-binding protein | D1781_04335 | Not Available | Positive | 848344 - 849219 | 29891.1 |
| amino acid abc transporter permease | D1781_04340 | Not Available | Positive | 849216 - 850067 | 30347.1 |
| amino acid abc transporter atp-binding protein | D1781_04345 | Not Available | Positive | 850064 - 850834 | 27816.3 |
| bluf domain-containing protein | D1781_04350 | Not Available | Positive | 850831 - 851361 | 19728.3 |
| thioredoxin | D1781_04355 | Not Available | Negative | 851390 - 851686 | 10156.2 |
| type 1 glutamine amidotransferase | D1781_04360 | Not Available | Positive | 851732 - 852301 | 19821.2 |
| duf2306 domain-containing protein | D1781_04365 | Not Available | Negative | 852291 - 852833 | 19327.9 |
| abc transporter permease | D1781_04370 | Not Available | Negative | 852886 - 853920 | 35749.6 |
| winged helix dna-binding domain-containing protein | D1781_04375 | Not Available | Negative | 853952 - 855319 | 47600.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
