Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | D1781_04275 | Not Available | Positive | 837142 - 838551 | 47675.2 |
| hnh endonuclease | D1781_04280 | Not Available | Positive | 838810 - 840207 | 50357.6 |
| hypothetical protein | D1781_04285 | Not Available | Negative | 840230 - 841639 | 51217.0 |
| cytosine deaminase | D1781_04290 | Not Available | Positive | 841710 - 842948 | 42906.4 |
| cupin domain-containing protein | D1781_04295 | Not Available | Positive | 842945 - 843403 | 16243.1 |
| arac family transcriptional regulator | D1781_04305 | Not Available | Negative | 843810 - 844271 | 16792.2 |
| alpha/beta fold hydrolase | D1781_04310 | Not Available | Negative | 844294 - 845040 | 25859.8 |
| marr family transcriptional regulator | D1781_04315 | Not Available | Positive | 845178 - 845510 | 12220.7 |
| lysr family transcriptional regulator | D1781_04320 | Not Available | Negative | 845566 - 846444 | 31740.4 |
| mfs transporter | D1781_04325 | Not Available | Positive | 846548 - 847834 | 44791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
