Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D1781_04175 | Not Available | Positive | 813748 - 815412 | 58341.2 |
| llm class flavin-dependent oxidoreductase | D1781_04180 | Not Available | Positive | 815430 - 816458 | 36993.3 |
| aminopeptidase n | D1781_04185 | Not Available | Positive | 816505 - 819051 | 92644.0 |
| hypothetical protein | D1781_04190 | Not Available | Negative | 819064 - 820350 | 43920.2 |
| sigma-70 family rna polymerase sigma factor | D1781_04195 | Not Available | Negative | 820347 - 820931 | 21143.2 |
| fad-dependent oxidoreductase | D1781_04200 | Not Available | Negative | 821056 - 822006 | 33083.9 |
| nucleoside deaminase | D1781_04205 | Not Available | Negative | 822003 - 822596 | 20879.6 |
| hypothetical protein | D1781_04210 | Not Available | Negative | 822611 - 823114 | 16631.8 |
| rna polymerase sigma factor | D1781_04215 | Not Available | Negative | 823111 - 823779 | 24855.8 |
| duf4349 domain-containing protein | D1781_04220 | Not Available | Negative | 823692 - 824546 | 28128.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
