Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | D1781_04075 | Not Available | Negative | 791847 - 792569 | 24956.3 |
| radical sam protein | D1781_04080 | Not Available | Positive | 792633 - 793754 | 40410.5 |
| hypothetical protein | D1781_04085 | Not Available | Negative | 793742 - 794452 | 25887.3 |
| sodium:proton antiporter | D1781_04090 | Not Available | Positive | 794495 - 796192 | 59205.9 |
| alpha/beta hydrolase | D1781_04095 | Not Available | Positive | 796336 - 797181 | 30198.2 |
| marr family transcriptional regulator | D1781_04100 | Not Available | Negative | 797191 - 797616 | 15308.3 |
| tryptophan-rich sensory protein | D1781_04105 | Not Available | Positive | 797693 - 798490 | 26673.2 |
| gfo/idh/moca family oxidoreductase | D1781_04110 | Not Available | Positive | 798576 - 799670 | 39285.3 |
| trehalose utilization protein thua | D1781_04115 | Not Available | Positive | 799667 - 800401 | 27202.0 |
| transcriptional repressor | D1781_04120 | Not Available | Positive | 800533 - 800997 | 16052.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
