Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | D1781_03975 | Not Available | Positive | 768490 - 768915 | 15065.0 |
| pdz domain-containing protein | D1781_03980 | Not Available | Negative | 768926 - 769849 | 30789.0 |
| hypothetical protein | D1781_03985 | Not Available | Positive | 769859 - 770389 | 18676.6 |
| m56 family peptidase | D1781_03990 | Not Available | Positive | 770386 - 771204 | 28598.2 |
| duf5134 domain-containing protein | D1781_03995 | Not Available | Positive | 771214 - 771846 | 21315.5 |
| duf1775 domain-containing protein | D1781_04000 | Not Available | Positive | 771888 - 772613 | 24434.8 |
| hypothetical protein | D1781_04005 | Not Available | Positive | 772610 - 774199 | 53523.1 |
| cu(2+)-exporting atpase | D1781_04010 | Not Available | Negative | 774222 - 776492 | 77516.1 |
| cytochrome c oxidase assembly protein | D1781_04015 | Not Available | Positive | 776571 - 778643 | 72644.6 |
| divalent metal cation transporter mnth | D1781_04020 | Not Available | Positive | 778745 - 779992 | 41892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
