Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4395 domain-containing protein | D1781_03925 | Not Available | Negative | 757911 - 758366 | 15649.7 |
| thioredoxin | D1781_03930 | Not Available | Negative | 758363 - 758794 | 14963.2 |
| carbohydrate abc transporter permease | D1781_03935 | Not Available | Positive | 758873 - 759781 | 31597.2 |
| serine/threonine protein kinase | D1781_03940 | Not Available | Negative | 759787 - 761178 | 48712.1 |
| fad-binding dehydrogenase | D1781_03945 | Not Available | Positive | 761326 - 762993 | 58881.8 |
| tetr/acrr family transcriptional regulator | D1781_03950 | Not Available | Positive | 763070 - 763732 | 23013.6 |
| mfs transporter | D1781_03955 | Not Available | Positive | 763771 - 764964 | 40392.1 |
| amino acid deaminase/aldolase | D1781_03960 | Not Available | Positive | 764961 - 766181 | 43430.2 |
| fad-binding protein | D1781_03965 | Not Available | Positive | 766178 - 767482 | 46884.8 |
| zinc-binding alcohol dehydrogenase family protein | D1781_03970 | Not Available | Negative | 767483 - 768433 | 32934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
