Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1211 domain-containing protein | D1781_03830 | Not Available | Positive | 734795 - 735412 | 22890.3 |
| dha2 family efflux mfs transporter permease subunit | D1781_03835 | Not Available | Positive | 735610 - 737088 | 50364.2 |
| gaf domain-containing protein | D1781_03840 | Not Available | Positive | 737243 - 738388 | 41707.3 |
| gnat family n-acetyltransferase | D1781_03845 | Not Available | Positive | 738423 - 739001 | 19842.3 |
| atp-dependent rna helicase hrpa | D1781_03850 | Not Available | Negative | 739066 - 743151 | 149141.0 |
| nadh:flavin oxidoreductase/nadh oxidase | D1781_03855 | Not Available | Negative | 743067 - 744185 | 39624.7 |
| glsb/yeaq/ymge family stress response membrane protein | D1781_03860 | Not Available | Positive | 744311 - 744589 | 9223.82 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 744423 - 744803 | Not Available |
| hypothetical protein | D1781_03865 | Not Available | Positive | 744698 - 744895 | 6512.98 |
| thioredoxin domain-containing protein | D1781_03870 | Not Available | Positive | 744910 - 746736 | 63490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
