Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | D1781_03675 | Not Available | Positive | 701146 - 702378 | 42763.1 |
| l-fuconate dehydratase | D1781_03680 | Not Available | Positive | 702465 - 703826 | 49442.6 |
| hypothetical protein | D1781_03685 | Not Available | Negative | 704471 - 705811 | 50009.0 |
| Trna-arg | Not Available | Not Available | Positive | 707468 - 707542 | Not Available |
| nuclear transport factor 2 family protein | D1781_03700 | Not Available | Positive | 707527 - 707931 | 15606.0 |
| scyd/scye family protein | D1781_03705 | Not Available | Positive | 708115 - 709902 | 62612.2 |
| aaa family atpase | D1781_03710 | Not Available | Positive | 710100 - 713777 | 133430.0 |
| large conductance mechanosensitive channel protein mscl | D1781_03715 | Not Available | Negative | 714029 - 714469 | 15569.3 |
| fmdb family transcriptional regulator | D1781_03720 | Not Available | Negative | 714521 - 714862 | 11118.3 |
| 5-formyltetrahydrofolate cyclo-ligase | D1781_03725 | Not Available | Negative | 714870 - 715481 | 22644.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
