Amnibacterium setariae strain DD4a

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Amnibacterium

Description

Amnibacterium setariae strain DD4a is a Gram-positive, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number QXTG00000000.1, which provides a reference for its genomic information and classification. The Gram-positive nature of A. setariae indicates that it possesses a thick peptidoglycan layer in its cell wall, a feature commonly associated with increased resistance to environmental stressors. The rod shape is typical of many bacterial species and may influence its motility and ecological interactions. The presence of a single replicon suggests a streamlined genomic structure, which can be associated with efficient replication processes and potentially a focused metabolic capability. This trait may facilitate adaptation to specific ecological niches, particularly in environments where resources are limited. In summary, Amnibacterium setariae strain DD4a exhibits significant traits such as being Gram-positive, rod-shaped, and possessing a single replicon. These characteristics may play a crucial role in its ecological interactions and adaptability, making it an interesting subject for further microbiological and ecological studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAmnibacterium
SpeciesAmnibacterium setariae
Strainstrain DD4a

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amnibacterium setariae strain DD4a


Gene Summary

Adenine Count

456377 bp

Thymine Count

452969 bp

Guanine Count

1283414 bp

Cytosine Count

1289945 bp

Genome Length

3482706 bp

Protein-coding Genes

3370 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
extracellular solute-binding proteinD1781_03675Not AvailablePositive701146 - 70237842763.1
l-fuconate dehydrataseD1781_03680Not AvailablePositive702465 - 70382649442.6
hypothetical proteinD1781_03685Not AvailableNegative704471 - 70581150009.0
Trna-argNot AvailableNot AvailablePositive707468 - 707542Not Available
nuclear transport factor 2 family proteinD1781_03700Not AvailablePositive707527 - 70793115606.0
scyd/scye family proteinD1781_03705Not AvailablePositive708115 - 70990262612.2
aaa family atpaseD1781_03710Not AvailablePositive710100 - 713777133430.0
large conductance mechanosensitive channel protein msclD1781_03715Not AvailableNegative714029 - 71446915569.3
fmdb family transcriptional regulatorD1781_03720Not AvailableNegative714521 - 71486211118.3
5-formyltetrahydrofolate cyclo-ligaseD1781_03725Not AvailableNegative714870 - 71548122644.8

Displaying genes 731 – 740 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.