Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase | D1781_03525 | Not Available | Negative | 672332 - 672739 | 15130.5 |
| duf3263 domain-containing protein | D1781_03530 | Not Available | Positive | 672853 - 673164 | 11964.2 |
| lytr family transcriptional regulator | D1781_03535 | Not Available | Positive | 673239 - 673784 | 18269.6 |
| cold-shock protein | D1781_03540 | Not Available | Positive | 673949 - 674152 | 7227.42 |
| chaperonin groel | D1781_03545 | Not Available | Positive | 674348 - 675970 | 56856.1 |
| wxg100 family type vii secretion target | D1781_03550 | Not Available | Negative | 676104 - 676391 | 10005.7 |
| sensor histidine kinase | D1781_03555 | Not Available | Negative | 676438 - 678126 | 60556.2 |
| dna-binding response regulator | D1781_03560 | Not Available | Negative | 678191 - 678886 | 25717.9 |
| hypothetical protein | D1781_03565 | Not Available | Negative | 678961 - 679233 | 9409.01 |
| cold shock domain-containing protein | D1781_03570 | Not Available | Positive | 679348 - 679728 | 13514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
