Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | D1781_03470 | Not Available | Positive | 661733 - 662431 | 25645.2 |
| hypothetical protein | D1781_03475 | Not Available | Negative | 662558 - 663169 | 20454.9 |
| card family transcriptional regulator | D1781_03480 | Not Available | Positive | 663335 - 663817 | 17999.6 |
| cysteine--trna ligase | D1781_03490 | Not Available | Positive | 664964 - 666370 | 50255.9 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | D1781_03495 | Not Available | Positive | 666360 - 667316 | 33605.5 |
| hypothetical protein | D1781_03500 | Not Available | Positive | 667516 - 668355 | 31208.4 |
| duf4032 domain-containing protein | D1781_03505 | Not Available | Negative | 668439 - 669734 | 48676.9 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | D1781_03510 | Not Available | Negative | 669731 - 670828 | 39559.4 |
| hypothetical protein | D1781_03515 | Not Available | Positive | 670878 - 671978 | 39187.5 |
| Trna-thr | Not Available | Not Available | Positive | 672049 - 672121 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
