Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 642482 - 642557 | Not Available |
| dna-directed rna polymerase subunit beta | D1781_03370 | Not Available | Positive | 642855 - 643454 | 21136.0 |
| sigma-70 family rna polymerase sigma factor | D1781_03375 | Not Available | Positive | 643694 - 644287 | 22324.7 |
| anti-sigma factor | D1781_03380 | Not Available | Positive | 644284 - 645090 | 27676.0 |
| phosphate abc transporter atp-binding protein | D1781_03385 | Not Available | Negative | 645196 - 645975 | 28383.1 |
| phosphate abc transporter permease psta | D1781_03390 | Not Available | Negative | 646008 - 647084 | 37906.7 |
| phosphate abc transporter permease subunit pstc | D1781_03395 | Not Available | Negative | 647084 - 648028 | 32718.7 |
| phosphate abc transporter substrate-binding protein psts | D1781_03400 | Not Available | Negative | 648117 - 649181 | 35455.6 |
| nudix hydrolase | D1781_03405 | Not Available | Negative | 649524 - 650474 | 33895.7 |
| rna degradosome polyphosphate kinase | D1781_03410 | Not Available | Negative | 650471 - 652639 | 81008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
