Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | D1781_03165 | Not Available | Positive | 610672 - 611079 | 14132.3 |
| duf3618 domain-containing protein | D1781_03170 | Not Available | Positive | 611076 - 611645 | 19376.4 |
| hypothetical protein | D1781_03175 | Not Available | Negative | 611711 - 612280 | 20717.6 |
| glutathione-dependent formaldehyde dehydrogenase | D1781_03180 | Not Available | Negative | 612292 - 613440 | 41265.4 |
| mfs transporter | D1781_03185 | Not Available | Negative | 613608 - 614954 | 47148.1 |
| gaf domain-containing protein | D1781_03190 | Not Available | Negative | 615063 - 616130 | 38303.4 |
| dabb family protein | D1781_03195 | Not Available | Positive | 616248 - 616556 | 10982.9 |
| fmn-binding negative transcriptional regulator | D1781_03200 | Not Available | Negative | 616919 - 617524 | 22548.4 |
| cation transporter | D1781_03205 | Not Available | Positive | 617574 - 618191 | 21004.9 |
| gaf domain-containing protein | D1781_03210 | Not Available | Negative | 618196 - 619569 | 50346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
