Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D1781_03115 | Not Available | Positive | 601111 - 601902 | 27829.6 |
| abc transporter atp-binding protein | D1781_03120 | Not Available | Positive | 601941 - 602678 | 25907.6 |
| sdr family oxidoreductase | D1781_03125 | Not Available | Positive | 602711 - 603505 | 27065.2 |
| sdr family oxidoreductase | D1781_03130 | Not Available | Negative | 603527 - 604318 | 27292.6 |
| sdr family nad(p)-dependent oxidoreductase | D1781_03135 | Not Available | Positive | 604378 - 605106 | 24961.6 |
| tetr/acrr family transcriptional regulator | D1781_03140 | Not Available | Positive | 605106 - 605699 | 21527.5 |
| mfs transporter | D1781_03145 | Not Available | Positive | 605850 - 607097 | 41829.8 |
| beta-glucosidase | D1781_03150 | Not Available | Positive | 607094 - 609334 | 79807.5 |
| atp-dependent dna ligase | D1781_03155 | Not Available | Negative | 609374 - 609724 | 12972.4 |
| hypothetical protein | D1781_03160 | Not Available | Positive | 609995 - 610675 | 23430.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
