Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | D1781_03065 | Not Available | Positive | 591429 - 592340 | 32176.6 |
| bifunctional 2-methylcitrate synthase/citrate synthase | D1781_03070 | Not Available | Positive | 592357 - 593478 | 40571.1 |
| abc transporter permease | D1781_03075 | Not Available | Positive | 593505 - 594251 | 25193.6 |
| hypothetical protein | D1781_03080 | Not Available | Negative | 594261 - 594650 | 13654.8 |
| srpbcc family protein | D1781_03085 | Not Available | Negative | 595056 - 595448 | 13999.5 |
| alpha/beta hydrolase | D1781_03090 | Not Available | Positive | 595514 - 596395 | 30840.4 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | D1781_03095 | Not Available | Positive | 596451 - 597758 | 45859.1 |
| abc transporter substrate-binding protein | D1781_03100 | Not Available | Positive | 597795 - 599297 | 52434.9 |
| abc transporter permease | D1781_03105 | Not Available | Positive | 599313 - 600263 | 32828.6 |
| abc transporter permease | D1781_03110 | Not Available | Positive | 600260 - 601114 | 29865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
