Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | D1781_02965 | Not Available | Negative | 572331 - 572756 | 15310.2 |
| formyltetrahydrofolate deformylase | D1781_02970 | Not Available | Negative | 572956 - 573816 | 31364.5 |
| moxr family atpase | D1781_02975 | Not Available | Positive | 573950 - 574933 | 34710.7 |
| duf58 domain-containing protein | D1781_02980 | Not Available | Positive | 574934 - 576097 | 40466.2 |
| transglutaminase domain-containing protein | D1781_02985 | Not Available | Positive | 576090 - 578276 | 73875.6 |
| serine hydroxymethyltransferase | D1781_02990 | Not Available | Positive | 578360 - 579655 | 45904.5 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | D1781_02995 | Not Available | Negative | 579838 - 580674 | 29047.9 |
| aldose epimerase | D1781_03000 | Not Available | Positive | 580851 - 581771 | 33053.1 |
| duf3054 domain-containing protein | D1781_03005 | Not Available | Negative | 581848 - 582258 | 14769.4 |
| anion permease | D1781_03010 | Not Available | Positive | 582355 - 583512 | 38474.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
