Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kinase | D1781_02915 | Not Available | Positive | 562719 - 563222 | 18034.3 |
| abc transporter atp-binding protein | D1781_02920 | Not Available | Positive | 563623 - 565407 | 64903.9 |
| abc transporter atp-binding protein | D1781_02925 | Not Available | Positive | 565404 - 567215 | 66021.9 |
| dha2 family efflux mfs transporter permease subunit | D1781_02930 | Not Available | Negative | 567329 - 568741 | 48487.7 |
| tetr/acrr family transcriptional regulator | D1781_02935 | Not Available | Positive | 568828 - 569415 | 21555.9 |
| dna-binding protein | D1781_02940 | Not Available | Negative | 569438 - 569761 | 11376.5 |
| gnat family n-acetyltransferase | D1781_02945 | Not Available | Negative | 569838 - 570290 | 16393.3 |
| nadp-dependent isocitrate dehydrogenase | D1781_02950 | Not Available | Positive | 570402 - 571619 | 44894.1 |
| atp-dependent dna ligase | D1781_02955 | Not Available | Positive | 571626 - 571931 | 11143.3 |
| hypothetical protein | D1781_02960 | Not Available | Positive | 571935 - 572270 | 11923.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
