Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | D1781_02865 | Not Available | Positive | 552078 - 552983 | 32968.7 |
| atp-dependent dna helicase pcra | D1781_02870 | Not Available | Positive | 552991 - 555300 | 84372.6 |
| gnat family acetyltransferase | D1781_02875 | Not Available | Positive | 555297 - 555746 | 16023.2 |
| marr family transcriptional regulator | D1781_02880 | Not Available | Negative | 555812 - 556312 | 18311.7 |
| adp-forming succinate--coa ligase subunit beta | D1781_02885 | Not Available | Positive | 556440 - 557606 | 40331.1 |
| succinate--coa ligase subunit alpha | D1781_02890 | Not Available | Positive | 557620 - 558510 | 29918.2 |
| hypothetical protein | D1781_02895 | Not Available | Positive | 558705 - 559814 | 34768.0 |
| phosphoribosylglycinamide formyltransferase | D1781_02900 | Not Available | Positive | 559825 - 560412 | 20695.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | D1781_02905 | Not Available | Positive | 560409 - 561986 | 54448.6 |
| deaminase | D1781_02910 | Not Available | Positive | 562119 - 562682 | 20571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
